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South African Journal of Science

On-line version ISSN 1996-7489
Print version ISSN 0038-2353

S. Afr. j. sci. vol.111 n.1-2 Pretoria Jan./Feb. 2015 



The prevalence of free-living amoebae in a South African hospital water distribution system



Petros MuchesaI; Tobias G. BarnardI; Catheleen BartieII

IWater and Health Research Centre, Department of Biomedical Technology, University of Johannesburg, Johannesburg, South Africa
IIImmunology and Microbiology, National Institute for Occupational Health, Johannesburg, South Africa





The purpose of this study was to investigate the occurrence of free-living amoebae in the water system of a teaching hospital in Johannesburg (South Africa). Water and biofilm samples were collected from the theatres, theatre sterilisation service unit, central sterilisation service unit and endoscopy/bronchoscopy unit. The samples were filtered and seeded on non-nutrient agar spread with heat-killed Escherichia coli. Of the 71 samples collected, 63 (88.7%) were positive for free-living amoeba. Acanthamoeba spp., Balamuthia spp. and Hartmanella spp. were identified by morphology. The presence of free-living amoeba in the hospital water network may be a potential health risk.

Keywords: free-living amoebae; nosocomial infections; Acanthamoeba; Hartmanella; Balamuthia




Free-living amoebae (FLA) are unicellular protozoans that are widely distributed in aquatic environments, including constructed water systems such as hospital water systems and swimming pools.1,2 Although FLA are useful as predators of bacteria, algae, viruses and fungi in the environment, some species - Naegleria fowleri, Balamuthia mandrillaris, Sappinia pedata and Acanthamoeba species - have been implicated in infections of the central nervous system, eye and skin.3,4 Some FLA also allow the survival and growth of bacterial pathogens linked to nosocomial infections such as Legionella pneumophila, Mycobacteria, Pseudomonas aerugionosa and Acinetobacter baumannii. These bacteria are able to infect, resist the digestive process of FLA, survive, multiply and exit FLA. Intracellular bacteria within FLA cysts are protected from hostile environmental conditions such as the presence of biocides used in water treatment.5,6 FLA may also serve as vehicles for transmission of waterborne bacterial pathogens, enabling them to spread and colonise hospital water systems. Furthermore, bacteria that infect FLA can undergo morphological modifications within FLA and become more resistant to antibiotics and better adapted to survival in macrophages.7 Therefore the presence of FLA in hospital water supplies may present a potential health concern for medical personnel and immunocompromised patients.



From February to April 2014, 71 samples were collected from a teaching hospital in Johannesburg, South Africa. A total of 35 tap water samples, 30 tap swab samples and 6 showerhead swab samples were collected. The samples were collected from theatres (n=41), the theatre sterilisation service unit (n=4), the central sterilisation service unit (n=8) and the endoscopy/bronchoscopy unit (n=18). Temperature, pH, residual chlorine and total dissolved solids were measured at the site of collection.

Samples (500 mL) were concentrated by filtration using a 0.45-μm pore size cellulose nitrate membrane. Swabs were vortexed for 30 s in 10 mL of Page's amoeba saline in individual sterile tubes and the suspensions were concentrated by filtration. The filter membrane was placed upside down onto a non-nutrient agar overlaid with heat-killed Escherichia coli. The plate was then incubated aerobically at 32 °C and examined daily under a light microscope for the appearance of amoebal trophozoites and cysts. Amoebae were sub-cultured on fresh non-nutrient agar-E. coli plates three to four times and harvested by scraping the agar surface and re-suspending in 2 mL of Page's amoeba saline. The suspensions were inoculated in microtitre wells before being observed under an inverted microscope for the presence of amoebae species.



Water temperatures ranged between 19.0 °C and 27.0 °C (mean=23.1 °C), pH ranged between 7.5 and 8.0 (mean=7.9), total dissolved solids ranged from 110 mg/L to 187 mg/L (mean=109 mg/L) and residual chlorine ranged from 0.04 mg/L to 0.17 mg/L (mean=0.08 mg/L). Free-living amoebae were observed in 63 (88.7%) of the water and biofilm samples that were analysed using amoebal culture techniques. Of the samples collected, amoebae were recovered from 31 (43.7%) off the water and 32 (45.1%) of the swab samples taken from taps and showerheads. Typical Acanthamoeba spp., Balamuthia spp. and Hartmanella spp. were observed in samples that were positive based on their morphology (Figure 1). Of the positive samples, 7 (11.3%) were Acanthamoeba species, 20 (32.3%) were Hartmanella species and 12 (19.4%) were Balamuthia species. The other 24 (38.7%) were not morphologically classified as belonging to any species (Table 1). Negative samples were from the theatre sterilisation service unit (2), the central sterilisation service unit (2), the endoscopy/bronchoscopy unit (2) and theatres (3).



To our knowledge, this is the first report on the occurrence of FLA in a South African hospital water system. All physico-chemical parameters analysed in this study were within prescribed South African guidelines for drinking water.8 Using amoebal enrichment, the prevalence of amoebae in this study - 88.7% - is higher than the prevalence found in previous studies done by Rohr et al.9 and Lasheras et al.10, in which 50% and 68.9% of samples, respectively, were positive for amoebae. In a study by Thomas et al.11, amoebae were detected in 11.5% of water samples and 5.7% of taps and showerheads in a Swiss hospital, compared with the 43.7% of water and 43.7% of swab samples that were positive in this study. A more recent study by Ovrutsky et al.1 recovered amoebae, mainly from biofilm, in 14.8% of hospital samples analysed. The higher prevalence of amoebae observed in our study could be a result of the relatively lower temperatures of cold water samples compared with the relatively high temperatures of hot water samples analysed in other studies. FLA with a low temperature tolerance would not survive the temperatures applicable in the other studies, which were above 45 °C.1,9,10 High amoebae recovery rates may also be caused by increased water age in the distribution system, which encourages microbial re-growth.12 Co§kun et al.13 reports that 24 out of 33 detected FLA from 150 drinking water samples were of the genus Hartmanella. These data are consistent with our findings that 20 out of 63 detected FLA were Hartmanella spp., 7 were Acanthamoeba spp. and 12 were Balamuthia spp. (Table 1). The detection of FLA in this study indicates that the large population of immunocompromised individuals in this health-care setting might be exposed to these organisms. The pathogenic potential of Acanthamoeba spp. and Balamuthia spp. isolated in this study may play a significant role in hospital-acquired (nosocomial) infections in patients exposed through water systems. The presence of FLA may also present an added risk for a health-care setting, as FLA have been described as reservoirs and disseminators of opportunistic bacterial pathogens associated with water-related diseases. These pathogens have been implicated in nosocomial infections such as Legionella pneumophila, non-tuberculous mycobacteria, Pseudomonas aeruginosa and Acinetobacter baumannii.14

Information on the prevalence of FLA in hospital networks may help identify connections between environment and patient infections. This identification will assist physicians to diagnose and treat amoebae-related infections in immunocompromised individuals. In addition, infection control staff can take precautions to prevent exposure to patients based on reported FLA data. Future work will focus on the molecular analysis of FLA using the polymerase chain reaction and sequencing to confirm FLA identified by morphology and to detect the other 24 isolates not identified in this study. The association between FLA and potential nosocomial bacterial pathogens will also be determined.



We thank the National Institute for Occupational Health and the University of Johannesburg for providing facilities for this project and the National Research Foundation for providing a bursary. We also acknowledge the Water Research Commission for funding the project.


Authors' contributions

PM. performed the experiments and wrote the manuscript. C.D. was the project leader, made conceptual contributions and assisted in the data analysis. T.G.B. made conceptual contributions and assisted in project design.



1. Ovrutsky AR, Chan ED, Kartalija M, Bai X, Jackson M, Gibbs S, et al. Cooccurrence of free-living amoebae and nontuberculous mycobacteria in hospital water networks, and preferential growth of Mycobacterium avium in Acanthamoeba lenticulata. Appl Environ Microbiol. 2013;79:3185-3192.        [ Links ]

2. Init I, Lau YL, Arin Fadzlun A, Foead AI, Neilson RS, Nissapatorn V. Detection of free living amoebae, Acanthamoeba and Naegleria, in swimming pools, Malaysia. Trop Biomed. 2010;27:566-577.         [ Links ]

3. Visvesvara GS, Moura H, Schuster FL. Pathogenic and opportunistic free-living amoebae: Acanthamoeba spp., Balamuthia mandrillaris, Naegleria fowleri, and Sappiniadiploidea. FEMS Immunol Med Microbiol. 2007;50:1-26.        [ Links ]

4. Da Rocha-Azevedo B, Tanowitz HB, Marciano-Cabral F. Diagnosis of infections caused by pathogenic free-living amoebae. Interdiscip Perspect Infect Dis. 2009;2009:251406.         [ Links ]

5. Greub G, Raoult D. Microorganisms resistant to free-living amoebae. Clin Microbiol Rev. 2004;17:413-433.        [ Links ]

6. Loret JF, Greub G. Free-living amoebae: Biological by-passes in water treatment. Int J Hyg Environ Health. 2010;213:167-175.        [ Links ]

7. Molmeret M, Horn M, Wagner M, Santic M, Abu Kwaik Y. Amoebae as training grounds for intracellular bacterial pathogens. Appl Environ Microbiol. 2005;71:20-28.        [ Links ]

8. South African National Standards. Drinking water. Part 1: Microbiological, physical, aesthetic and chemical determinants. SANS 241-1 (2011).         [ Links ]

9. Rohr U, Weber S, Michel R, Selenka F, Wilhelm M. Comparison of free-living amoebae in hot water systems of hospitals with isolates from moist sanitary areas by identifying genera and determining temperature tolerance. Appl Env Microbiol. 1998;64:1822-1824.         [ Links ]

10. Lasheras A, Boulestreau H, Rogues A-M, Ohayon-Courtes C, Labadie J-C, Gachie J-P. Influence of amoebae and physical and chemical characteristics of water on presence and proliferation of Legionella species in hospital water systems. Am J Infect Control. 2006;34:520-525.        [ Links ]

11. Thomas V Herrera-Rimann K, Blanc DS, Greub G. Biodiversity of amoebae and amoeba-resisting bacteria in a hospital water network. Appl Environ Microbiol. 2006;72:2428-2438.        [ Links ]

12. Economic and Engineering Services Inc. Effects of water age on distribution system water quality. Office of Ground Water and Drinking Water Distribution System Issue Paper. Washington DC: Office of Ground Water and Drinking Water Standards and Risk Management Division, US Environmental Protection Agency; 2002. Available from:        [ Links ]

13. Co§kun KA, Ozçelik S, Tutar L, Elaldi N, Tutar Y Isolation and identification of free-living amoebae from tap water in Sivas, Turkey. Biomed Res Int. 2013;675145.         [ Links ]

14. Cateau E, Delafont V, Hechard Y, Rodier MH. Free-living amoebae: What part do they play in healthcare-associated infections? J Hosp Infect. 2014;87(3):131-140.        [ Links ]



Petros Muchesa
Water and Health Research Centre
Department of Biomedical Technology, Faculty of Health Sciences
University of Johannesburg
PO Box 17011, Doornfontein 2028, South Africa

Received: 12 Aug. 2014
Revised: 27 Oct. 2014
Accepted: 05 Nov. 2014

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